Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015819776.1_cds_XP_016500168.1_14021
CDS Infomation

[gene=LOC107818643] [db_xref=GeneID:107818643] [protein=probable pectinesterase/pectinesterase inhibitor 25] [protein_id=XP_016500168.1] [location=join(26184..26867,32324..32663,32779..33467)] [gbkey=CDS]
Sequence

ATGTCAAAGCAGCTCCTACTCTTCTTCCTCACTATTCCCTTCATCTTTTTTTCTTTAGCT
CTACCAATTATCGGCCAAAGTATTCCTCCATCACAATCACCTTCCATCGCATGCAAATCC
TCACTTTACCCAAAACTCTGTCGATCCCTTCTCTCTGCATTTCAGCATTCTCCTTCTAAC
CCAAATGACTACAGCAAGTTCTCTGTGAAGCAATGCCAGAAAAATGCCGGCAAATTGTCC
AACTTAATCGCACATTTTCTTACAACCCAGAAAGGGAGAGCACTATTTGTTAACACCAAA
GAGATTAGTGCTTTAAATGACTGTCACCAGCTCTCTGAGCTCACAGTCGATTACTTAGAG
TCCATCTCCGACGAGCTGAAAGCGGCTGACGGAGCCACAACTTCCGACGCTTTAGTTGGA
AAAATTCAGACATTGTTGAGTGCGGTGGTGACGAATCAGCAGACGTGTTATGAAGGACTG
AAAGAAGCAGGCAGTAGCATGGTGGCGGAATTGTTGGCGCCGCTGAGCAACGCGGCGGAA
ATCTACAGCGTGTCCCTTGGGCTGGTGGCGCATGCATTGGGACGCGTAAGGAAACCCAGA
AAAACTGGCGGATTGTTGGCTGAGCACAGAGGATTGATGGAGGAAGAGTACTGGGCACGA
GATTCAAGATTGATGGCTTCCAAGGTTAACCAAGCATCGGAGAGGTCTCATCAAAGGGGT
GGAAGGATTCTTGACGAGTTGGTAGAAAATGGTGTTCACATTAATCAAACAGTAACAGTT
AGTCCTTATGGTGGCTGCAACTTTACATCAATAGGTGAAGCCATTGCATTTGCGCCTAAT
AACTCGATGATTGAAGATGGCTACTTTCTCATCTACGCGAAGCAAGGATACTATGAGGAG
TATGTTGTCGTGCCAAAGAACAAGAAGAATATTATGTTGATTGGAGAAGGAGTTGATCTC
ACTGTGGTTGCTGGTAATCGAAGTGTCATAGACGGCTGGACAACCTATAATTCAGCAACC
TTTGCCGTTTCAGGGGAGCGATTTGTAGCCATAAACATAACCTTCAAGAACCTAGCTGGT
CCTTGGAAGCACCAAGCTGTAGCTCTAAGGAACAATGCGGACCTTTCCACATTCTATAGA
TGTCGTTTTGAGGGCTATCAAGATACTTTGTACACGCACTCTTTAAGACAATTCTACAGA
GAATGTGATATCTATGGTACAGTGGACTTCATATTTGGCAATGCAGCTGCAATATTCCAA
AACTGCAATATGTTTGCTAGGAAACCAATGCCAGATCAGAAGAATATTTTCACAGCACAA
GGCCGAAGTGATCCCAACCAAAACACTGGCATTTCTATCCAGAACTGCACCATTCAAGCT
GCACCTGATTTGGCTCAGGAGATGAATGGCACGTTAAGTTTTCTTGGCCGGCCTTGGCAC
AATTACTCTAGGACTGTTATCATGCAGTCGTATATAGGAGATGTGATCGCGCCCGTTGGA
TGGTTAGAGTGGAATGGGACGAATGGACTCGATACCCTTTACTATGGGGAGTTTGAGAAT
TATGGACCAGGGGCTAATACAACAACAAGAGTACAATGGCCTGGTTATAACTTAATGAAT
GCTTCACAAGCAATGAACTTTACTGTCTATAATTTTACTATGGGAGATACTTGGTTGCCC
TCTACAAATGTTCCTTTCTCTCAAGGCCTGTAG

Peptide Sequence

PEP ID

XP_016500168.1
PEP Infomation

PREDICTED: probable pectinesterase/pectinesterase inhibitor 25 [Nicotiana tabacum]
Sequence

MSKQLLLFFLTIPFIFFSLALPIIGQSIPPSQSPSIACKSSLYPKLCRSLLSAFQHSPSN
PNDYSKFSVKQCQKNAGKLSNLIAHFLTTQKGRALFVNTKEISALNDCHQLSELTVDYLE
SISDELKAADGATTSDALVGKIQTLLSAVVTNQQTCYEGLKEAGSSMVAELLAPLSNAAE
IYSVSLGLVAHALGRVRKPRKTGGLLAEHRGLMEEEYWARDSRLMASKVNQASERSHQRG
GRILDELVENGVHINQTVTVSPYGGCNFTSIGEAIAFAPNNSMIEDGYFLIYAKQGYYEE
YVVVPKNKKNIMLIGEGVDLTVVAGNRSVIDGWTTYNSATFAVSGERFVAINITFKNLAG
PWKHQAVALRNNADLSTFYRCRFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAAIFQ
NCNMFARKPMPDQKNIFTAQGRSDPNQNTGISIQNCTIQAAPDLAQEMNGTLSFLGRPWH
NYSRTVIMQSYIGDVIAPVGWLEWNGTNGLDTLYYGEFENYGPGANTTTRVQWPGYNLMN
ASQAMNFTVYNFTMGDTWLPSTNVPFSQGL

Transcript Sequence

Gene sequence data has not been registered.